Development of new computational amino acid parameters for protein structure/function analysis within the resonant recognition model

Pirogova, E and Cosic, I 2001, 'Development of new computational amino acid parameters for protein structure/function analysis within the resonant recognition model', in 23rd IEEE EMBS, Istanbul, Turkey, 25-28 October 2001, pp. 2890-2893.


Document type: Conference Paper
Collection: Conference Papers

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Title Development of new computational amino acid parameters for protein structure/function analysis within the resonant recognition model
Author(s) Pirogova, E
Cosic, I
Year 2001
Conference name 23rd Annual International Conference of the IEEE - Engineering in Medicine and Biology Society
Conference location Istanbul, Turkey
Conference dates 25-28 October 2001
Proceedings title 23rd IEEE EMBS
Publisher IEEE
Place of publication Istanbul, Turkey
Start page 2890
End page 2893
Abstract The Resonant Recognition Model (RRM) is a physico-mathematical model developed for analysis of protein and DNA sequences. Biological function of proteins and their 3D structures are determined by the linear sequences of amino acids. Previously, the electron-ion interaction potentials (EIIP) of amino acids have been used to determine the characteristic patterns of different proteins independent of their biological activity. In this study, the effect of various other amino acid parameters on periodicity, obtained using the RRR, were assessed. Here, we are proposing new computational amino acid parameters that could be used successfully for protein analysis instead of EIIP within the RRM.
Subjects Biomaterials
DOI - identifier 10.1109/IEMBS.2001.1017393
Copyright notice © 2001 IEEE. Personal use of this material is permitted. However, permission to reprint/republish this material for advertising or promotional purposes or for creating new collective works for resale or redistribution to servers or lists, or to reuse any copyrighted component of this work in other works must be obtained from the IEEE.
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