Bioturbation determines the response of benthic ammonia-oxidizing microorganisms to ocean acidification

Laverock, B, Kitidis, V, Tait, K, Gilbert, J, Osborn, A and Widdicombe, S 2013, 'Bioturbation determines the response of benthic ammonia-oxidizing microorganisms to ocean acidification', Philosophical Transactions of the Royal Society B, vol. 368, no. 1627, 20120441, pp. 1-13.


Document type: Journal Article
Collection: Journal Articles

Title Bioturbation determines the response of benthic ammonia-oxidizing microorganisms to ocean acidification
Author(s) Laverock, B
Kitidis, V
Tait, K
Gilbert, J
Osborn, A
Widdicombe, S
Year 2013
Journal name Philosophical Transactions of the Royal Society B
Volume number 368
Issue number 1627
Article Number 20120441
Start page 1
End page 13
Total pages 13
Publisher Royal Society Publishing
Abstract Ocean acidification (OA), caused by the dissolution of increasing concentrations of atmospheric carbon dioxide (CO2) in seawater, is projected to cause significant changes to marine ecology and biogeochemistry. Potential impacts on the microbially driven cycling of nitrogen are of particular concern. Specifically, under seawater pH levels approximating future OA scenarios, rates of ammonia oxidation (the rate-limiting first step of the nitrification pathway) have been shown to dramatically decrease in seawater, but not in underlying sediments. However, no prior study has considered the interactive effects of microbial ammonia oxidation and macrofaunal bioturbation activity, which can enhance nitrogen transformation rates. Using experimental mesocosms, we investigated the responses to OA of ammonia oxidizing microorganisms inhabiting surface sediments and sediments within burrow walls of the mud shrimp Upogebia deltaura. Seawater was acidified to one of four target pH values (pHT 7.90, 7.70, 7.35 and 6.80) in comparison with a control (pHT 8.10). At pHT 8.10, ammonia oxidation rates in burrow wall sediments were, on average, fivefold greater than in surface sediments. However, at all acidified pH values (pH ≤ 7.90), ammonia oxidation rates in burrow sediments were significantly inhibited (by 79-97%; p < 0.01), whereas rates in surface sediments were unaffected. Both bacterial and archaeal abundances increased significantly as pHT declined; by contrast, relative abundances of bacterial and archaeal ammonia oxidation (amoA) genes did not vary. This research suggests that OA could cause substantial reductions in total benthic ammonia oxidation rates in coastal bioturbated sediments, leading to corresponding changes in coupled nitrogen cycling between the benthic and pelagic realms.
Subject Microbiology not elsewhere classified
Keyword(s) Ammonia oxidation
Bioturbation
Marine sediments
Ocean acidification
Upogebia deltaura
DOI - identifier 10.1098/rstb.2012.0441
Copyright notice © 2013 The Authors. Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/3.0/, which permits unrestricted use, provided the original author and source are credited.
ISSN 0962-8436
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