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A taxonomy of suffix array construction algorithms

Puglisi, S, Smyth, W and Turpin, A 2007, 'A taxonomy of suffix array construction algorithms', ACM Computing Surveys (CSUR), vol. 39, no. 2, pp. 1-31.

Document type: Journal Article
Collection: Journal Articles

Title A taxonomy of suffix array construction algorithms
Author(s) Puglisi, S
Smyth, W
Turpin, A
Year 2007
Journal name ACM Computing Surveys (CSUR)
Volume number 39
Issue number 2
Start page 1
End page 31
Total pages 31
Publisher ACM
Abstract In 1990, Manber and Myers proposed suffix arrays as a space-saving alternative to suffix trees and described the first algorithms for suffix array construction and use. Since that time, and especially in the last few years, suffix array construction algorithms have proliferated in bewildering abundance. This survey paper attempts to provide simple high-level descriptions of these numerous algorithms that highlight both their distinctive features and their commonalities, while avoiding as much as possible the complexities of implementation details. New hybrid algorithms are also described. We provide comparisons of the algorithms' worst-case time complexity and use of additional space, together with results of recent experimental test runs on many of their implementations.
Copyright notice © 2007 ACM.
ISSN 0360-0300
 
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Created: Mon, 06 Dec 2010, 14:11:00 EST by Catalyst Administrator